Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fmicb.2021.624071

https://doi.org/10.3389/fmicb.2021.624071

Cited by: 10
Author(s): Miguel Semedo, Eva Lopes, Mafalda S. Baptista, Ainhoa Oller-Ruiz, Javier Gilabert, Maria Paola Tomasino, Catarina Magalhães
Published: about 3 years ago

Software Mentions 11

bioconductor: DECIPHER
Tools for curating, analyzing, and manipulating biological sequences
Papers that mentioned: 415
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: ggspatial
Spatial Data Framework for ggplot2
Papers that mentioned: 24
cran: PERMANOVA
Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292
cran: phangorn
Phylogenetic Reconstruction and Analysis
Papers that mentioned: 192
cran: rnaturalearth
World Map Data from Natural Earth
Papers that mentioned: 44
cran: sf
Simple Features for R
Papers that mentioned: 125
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562
pypi: decipher
Package for easier access to the Forsta Surveys REST API
Papers that mentioned: 10