Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fmicb.2020.587306

https://doi.org/10.3389/fmicb.2020.587306

An Improved Sequencing-Based Bioinformatics Pipeline to Track the Distribution and Clonal Architecture of Proviral Integration Sites

Cited by: 4
Author(s): Nicolas Rosewick, Vincent Hahaut, Keith Durkin, Maria Artesi, Snehal D. Karpe, Jérôme Wayet, Philip Griebel, Natasa Arsic, Ambroise Marçais, Olivier Hermine, Arsène Burny, Michel Georges, Anne Van den Broeke
Published: about 4 years ago

Software Mentions 5

cran: SAM
Sparse Additive Modelling
Papers that mentioned: 4,566
pypi: bowtie
Interactive Dashboard Toolkit.
Papers that mentioned: 1,566
pypi: build
A simple, correct Python build frontend
Papers that mentioned: 21
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562
pypi: seqtk
seqtk provides various tools for Sequence.
Papers that mentioned: 213