Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fmicb.2020.586437

https://doi.org/10.3389/fmicb.2020.586437

Co-infection of Chicken Layers With Histomonas meleagridis and Avian Pathogenic Escherichia coli Is Associated With Dysbiosis, Cecal Colonization and Translocation of the Bacteria From the Gut Lumen

Cited by: 13
Author(s): Mohamed Kamal Abdelhamid, Narciso M. Quijada, Monika Dzieciol, Tamas Hatfaludi, Ivana Bilić, Evelyne Selberherr, Dieter Liebhart, Claudia Heß, Michael Heß, Surya Paudel
Published: almost 4 years ago

Software Mentions 6

bioconductor: decontam
Identify Contaminants in Marker-gene and Metagenomics Sequencing Data
Papers that mentioned: 76
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
cran: dplyr
A Grammar of Data Manipulation
Papers that mentioned: 1,213
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: lemon
Freshing Up your 'ggplot2' Plots
Papers that mentioned: 4
pypi: decontam
Decontaminate paired-end DNA sequencing data
Papers that mentioned: 76