Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.3389/fmicb.2019.01955
https://doi.org/10.3389/fmicb.2019.01955
Microbial Communities Associated With Passive Acidic Abandoned Coal Mine Remediation
Cited by: 11
Author(s): Truc Ly, Justin Wright, Nicholas Weit, Christopher J. McLimans, Nikea Ulrich, Vasily Tokarev, Michelle M. Valkanas, Nancy Trun, Shawn Rummel, Christopher J. Grant, Regina Lamendella
Published: about 5 years ago
Software Mentions 2
bioconductor: pathview
a tool set for pathway based data integration and visualizationPapers that mentioned: 144
pypi: MetaPhlAn
MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.Papers that mentioned: 306