Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fmicb.2018.01620

https://doi.org/10.3389/fmicb.2018.01620

Cited by: 26
Author(s): Flora Jane Mary O'Brien, Marc G. Dumont, Jeremy S. Webb, Guy M. Poppy
Published: almost 6 years ago

Software Mentions 7

bioconductor: DESeq2

Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583

bioconductor: phyloseq

Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702

cran: ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441

cran: PERMANOVA

Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292

cran: vegan

Community Ecology Package
Papers that mentioned: 6,903

pypi: Sickle

A lightweight OAI client library for Python
Papers that mentioned: 740

pypi: STAMP

A graphical software package for analyzing taxonomic and functional profiles.
Papers that mentioned: 1,190