Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.3389/fmicb.2017.01587
https://doi.org/10.3389/fmicb.2017.01587
High-Resolution Microbiome Profiling for Detection and Tracking of Salmonella enterica
Cited by: 23
Author(s): Christopher J. Grim, Ninalynn Daquigan, Tina S. Lusk Pfefer, Andrea Ottesen, James R. White, Karen G. Jarvis
Published: over 7 years ago
Software Mentions 2
pypi: MetaPhlAn
MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.Papers that mentioned: 306