Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fmicb.2016.00469

https://doi.org/10.3389/fmicb.2016.00469

Reconstruction of Bacterial and Viral Genomes from Multiple Metagenomes

Cited by: 13
Author(s): Ankit Gupta, Sanjiv Kumar, Vishnu P. K. Prasoodanan, K. Harish, Ashok Sharma, Vineet K. Sharma
Published: over 8 years ago

Software Mentions 3

cran: ART
Aligned Rank Transform for Nonparametric Factorial Analysis
Papers that mentioned: 580
pypi: GroopM
Metagenomic binning suite
Papers that mentioned: 32
pypi: MetaPhlAn
MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.
Papers that mentioned: 306