Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fimmu.2021.730346

https://doi.org/10.3389/fimmu.2021.730346

Cited by: 6
Author(s): Brandi T. Johnson‐Weaver, Hae Woong Choi, Hui Yang, Joshua A. Granek, Cliburn Chan, Soman N. Abraham, Herman F. Staats
Published: over 2 years ago

Software Mentions 13

bioconductor: DESeq2

Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583

bioconductor: gage

Generally Applicable Gene-set Enrichment for Pathway Analysis
Papers that mentioned: 45

bioconductor: limma

Linear Models for Microarray Data
Papers that mentioned: 7,776

bioconductor: pathview

a tool set for pathway based data integration and visualization
Papers that mentioned: 144

cran: foreach

Provides Foreach Looping Construct
Papers that mentioned: 50

cran: fs

Cross-Platform File System Operations Based on 'libuv'
Papers that mentioned: 20

cran: pheatmap

Pretty Heatmaps
Papers that mentioned: 2,572

cran: plotly

Create Interactive Web Graphics via 'plotly.js'
Papers that mentioned: 163

cran: RColorBrewer

ColorBrewer Palettes
Papers that mentioned: 490

cran: STAR

Spike Train Analysis with R
Papers that mentioned: 5,759

cran: tidyverse

Easily Install and Load the 'Tidyverse'
Papers that mentioned: 1,023

pypi: fs

Python's filesystem abstraction layer
Papers that mentioned: 20

pypi: plotly

An open-source, interactive data visualization library for Python
Papers that mentioned: 163