Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fimmu.2021.677730

https://doi.org/10.3389/fimmu.2021.677730

Dual-Organ Transcriptomic Analysis of Rainbow Trout Infected With Ichthyophthirius multifiliis Through Co-Expression and Machine Learning

Cited by: 9
Author(s): HyeongJin Roh, Nameun Kim, Yoonhang Lee, Jiyeon Park, Bo Seong Kim, Mu Kun Lee, Chan-Il Park, Do-Hyung Kim
Published: over 3 years ago

Software Mentions 4

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: MLSeq
Machine Learning Interface for RNA-Seq Data
Papers that mentioned: 4
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017