Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fgene.2021.641788

https://doi.org/10.3389/fgene.2021.641788

Successful ATAC-Seq From Snap-Frozen Equine Tissues

Cited by: 8
Author(s): Sichong Peng, Rebecca R. Bellone, Jessica L. Petersen, Theodore S. Kalbfleisch, Carrie J. Finno
Published: over 3 years ago

Software Mentions 7

pypi: deepTools

Useful tools for exploring deep sequencing data.
Papers that mentioned: 435

pypi: MACS2

Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203

pypi: matplotlib

Python plotting package
Papers that mentioned: 1,045

pypi: numpy

Fundamental package for array computing in Python
Papers that mentioned: 832

pypi: pandas

Powerful data structures for data analysis, time series, and statistics
Papers that mentioned: 640

pypi: scipy

Fundamental algorithms for scientific computing in Python
Papers that mentioned: 1,071

pypi: UpSetPlot

Draw Lex et al.'s UpSet plots with Pandas and Matplotlib
Papers that mentioned: 4