Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fgene.2019.01361

https://doi.org/10.3389/fgene.2019.01361

Read Mapping and Transcript Assembly: A Scalable and High-Throughput Workflow for the Processing and Analysis of Ribonucleic Acid Sequencing Data

Cited by: 16
Author(s): Sateesh Peri, Susan C. Roberts, Isabella R Kreko, Lauren B McHan, Alexandra Naron, Archana Ram, Rebecca L. Murphy, Eric Lyons, Brian D. Gregory, Upendra Kumar Devisetty, Andrew D. L. Nelson
Published: almost 5 years ago

Software Mentions 4

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: browser
A package to prevent Dependency Confusion attacks against Yandex.
Papers that mentioned: 2,125
pypi: SE
A Python stream editor for command-line calls or integration into Python programs.
Papers that mentioned: 268