Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fgene.2019.00858

https://doi.org/10.3389/fgene.2019.00858

pathfindR: An R Package for Comprehensive Identification of Enriched Pathways in Omics Data Through Active Subnetworks

Cited by: 189
Author(s): Ege Ülgen, Özan Özışık, Uğur Sezerman
Published: about 5 years ago

Software Mentions 4

bioconductor: biomaRt
Interface to BioMart databases (i.e. Ensembl)
Papers that mentioned: 446
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: SPIA
Signaling Pathway Impact Analysis (SPIA) using combined evidence of pathway over-representation and unusual signaling perturbations
Papers that mentioned: 155
cran: pathfindR
Enrichment Analysis Utilizing Active Subnetworks
Papers that mentioned: 19