Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fgene.2019.00614

https://doi.org/10.3389/fgene.2019.00614

Pipeliner: A Nextflow-Based Framework for the Definition of Sequencing Data Processing Pipelines

Cited by: 17
Author(s): Anthony Federico, Tanya T Karagiannis, Kritika Karri, Dileep Kishore, Yusuke Koga, Joshua D. Campbell, Stefano Monti
Published: over 5 years ago

Software Mentions 4

cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071
pypi: RSeQC
RNA-seq QC Package
Papers that mentioned: 366
pypi: Sphinx
Python documentation generator
Papers that mentioned: 88