Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.3389/fgene.2018.00330
https://doi.org/10.3389/fgene.2018.00330
Across-Experiment Transcriptomics of Sheep Rumen Identifies Expression of Lipid/Oxo-Acid Metabolism and Muscle Cell Junction Genes Associated With Variation in Methane-Related Phenotypes
Cited by: 7
Author(s): Ruidong Xiang, Jody McNally, J. J. Bond, David J. Tucker, Cameron McCarthy, A. J. Donaldson, K. L. Austin, Suzanne Rowe, Arjan Jonker, C. S. Pinares-Patiño, John C. McEwan, Phil Vercoe, V. H. Oddy, Brian P. Dalrymple
Published: about 6 years ago
Software Mentions 4
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in RPapers that mentioned: 6,568
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assaysPapers that mentioned: 3,071