Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fcell.2020.593653

https://doi.org/10.3389/fcell.2020.593653

Cited by: 10
Author(s): Liu Yong-hong, Zhiyong Zhang, Wenjing Li, Shaomin Tian
Published: over 3 years ago

Software Mentions 5

bioconductor: GSVA

Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893

cran: JASPAR

R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matrices
Papers that mentioned: 1,283

cran: pheatmap

Pretty Heatmaps
Papers that mentioned: 2,572

cran: WGCNA

Weighted Correlation Network Analysis
Papers that mentioned: 3,479

pypi: GSVA

Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893