Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.3389/fbioe.2020.612832
https://doi.org/10.3389/fbioe.2020.612832
Multi-Omics Driven Metabolic Network Reconstruction and Analysis of Lignocellulosic Carbon Utilization in Rhodosporidium toruloides
Cited by: 23
Author(s): Joonhoon Kim, Samuel T. Coradetti, Young-Mo Kim, Yuqian Gao, Junko Yaegashi, Jeremy Zucker, Nathalie Munoz Munoz, Erika Zink, Kristin Burnum-Johnson, Scott E. Baker, Blake A. Simmons, Jeffrey M. Skerker, John M. Gladden, Jon Magnuson
Published: almost 4 years ago
Software Mentions 2
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
pypi: Escher
Escher: A Web Application for Building, Sharing, and Embedding Data-Rich Visualizations of Metabolic PathwaysPapers that mentioned: 43