Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.18632/oncotarget.28058

https://doi.org/10.18632/oncotarget.28058

Novel insights into the molecular mechanisms underlying risk of colorectal cancer from smoking and red/processed meat carcinogens by modeling exposure in normal colon organoids

Cited by: 4
Author(s): Matthew Devall, Christopher H. Dampier, Stephen Eaton, Mourad W. Ali, Virginia Díez-Obrero, Ferrán Moratalla-Navarro, Jennifer Bryant, Lucas T. Jennelle, Vı́ctor Moreno, Steven M. Powell, Ulrike Peters, Graham Casey
Published: about 3 years ago

Software Mentions 6

bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: variancePartition
Quantify and interpret drivers of variation in multilevel gene expression experiments
Papers that mentioned: 25
cran: lme4
Linear Mixed-Effects Models using 'Eigen' and S4
Papers that mentioned: 9,267
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071