Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.18632/oncotarget.25617

https://doi.org/10.18632/oncotarget.25617

Cancer-predicting transcriptomic and epigenetic signatures revealed for ulcerative colitis in patient-derived epithelial organoids

Cited by: 21
Author(s): Samaneh K. Sarvestani, Steven A. Signs, Véronique Lefebvre, Stephen C. Mack, Ying Ni, Andrew Morton, E. Ricky Chan, Xiaoxia Li, Paul L. Fox, Angela H. Ting, Matthew F. Kalady, Michael Cruise, Jean Ashburn, Jennifer Stiene, Lai Wei, Dávid Líška, Xiang Shao, Emina H. Huang
Published: over 6 years ago

Software Mentions 2

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203