Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.18632/oncotarget.23344

https://doi.org/10.18632/oncotarget.23344

APOBEC-mediated mutagenesis in urothelial carcinoma is associated with improved survival, mutations in DNA damage response genes, and immune response

Cited by: 83
Author(s): Alexander Glaser, Damiano Fantini, Yiduo Wang, Yu Yu, Kalen Rimar, Joseph R. Podojil, Stephen D. Miller, Joshua J. Meeks
Published: over 6 years ago

Software Mentions 5

bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: multiClust
multiClust: An R-package for Identifying Biologically Relevant Clusters in Cancer Transcriptome Profiles
Papers that mentioned: 2
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: survminer
Drawing Survival Curves using 'ggplot2'
Papers that mentioned: 1,473