Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.18632/oncotarget.15993

https://doi.org/10.18632/oncotarget.15993

Genome-wide DNA methylation analysis reveals molecular subtypes of pancreatic cancer

Cited by: 67
Author(s): Nitish K. Mishra, Chittibabu Guda
Published: over 7 years ago

Software Mentions 7

bioconductor: ComplexHeatmap
Make Complex Heatmaps
Papers that mentioned: 565
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: ELMER
Inferring Regulatory Element Landscapes and Transcription Factor Networks Using Cancer Methylomes
Papers that mentioned: 19
bioconductor: MethylMix
MethylMix: Identifying methylation driven cancer genes
Papers that mentioned: 53
bioconductor: RTCGAToolbox
A new tool for exporting TCGA Firehose data
Papers that mentioned: 22
cran: NMF
Algorithms and Framework for Nonnegative Matrix Factorization (NMF)
Papers that mentioned: 108
cran: samr
SAM: Significance Analysis of Microarrays
Papers that mentioned: 114