Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.18632/oncotarget.11733

https://doi.org/10.18632/oncotarget.11733

DMBA induced mouse mammary tumors display high incidence of activating <i>Pik3caH1047</i> and loss of function <i>Pten</i> mutations

Cited by: 45
Author(s): Martı́n C. Abba, Yi Zhong, Jae-Ho Lee, Hyunsuk Kil, Yue Lu, Yoko Takata, Melissa S. Simper, Sally Gaddis, Jianjun Shen, C. Marcelo Aldaz
Published: about 8 years ago

Software Mentions 4

bioconductor: GenomicAlignments
Representation and manipulation of short genomic alignments
Papers that mentioned: 134
bioconductor: GenomicFeatures
Conveniently import and query gene models
Papers that mentioned: 141
bioconductor: Rsamtools
Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import
Papers that mentioned: 138
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017