Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.18632/oncotarget.10834

https://doi.org/10.18632/oncotarget.10834

Cited by: 15
Author(s): Lin Pang, Jing Hu, Guanxiong Zhang, Xiang Li, Xinxin Zhang, Fulong Yu, Yujia Lan, Jiu Hua Xu, Bo Pang, Dong Han, Yun Xiao, Xia Li
Published: almost 8 years ago

Software Mentions 8

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: GOstats
Tools for manipulating GO and microarrays
Papers that mentioned: 368
cran: CPAT
Change Point Analysis Tests
Papers that mentioned: 299
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
pypi: browser
A package to prevent Dependency Confusion attacks against Yandex.
Papers that mentioned: 2,125
pypi: CPAT
CPAT (Coding Potential Assessment Tool)
Papers that mentioned: 299
pypi: MACS
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,233