Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.18632/aging.202871

https://doi.org/10.18632/aging.202871

Cited by: 4
Author(s): Zhuo Lin, Dan Miao, Xu Qian, Xiaodong Wang, Fang Yu
Published: about 3 years ago

Software Mentions 12

bioconductor: GSVA

Gene Set Variation Analysis for microarray and RNA-seq data
Papers that mentioned: 893

bioconductor: limma

Linear Models for Microarray Data
Papers that mentioned: 7,776

cran: corrplot

Visualization of a Correlation Matrix
Papers that mentioned: 1,077

cran: ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441

cran: ggpubr

'ggplot2' Based Publication Ready Plots
Papers that mentioned: 856

cran: igraph

Network Analysis and Visualization
Papers that mentioned: 1,555

cran: pheatmap

Pretty Heatmaps
Papers that mentioned: 2,572

cran: survminer

Drawing Survival Curves using 'ggplot2'
Papers that mentioned: 1,473

cran: venn

Draw Venn Diagrams
Papers that mentioned: 44

pypi: GSVA

Python CLI and module for running the GSVA R bioconductor package with Python Pandas inputs and outputs.
Papers that mentioned: 893

pypi: igraph

High performance graph data structures and algorithms
Papers that mentioned: 1,555

pypi: venn

Venn diagrams for 2, 3, 4, 5, 6 sets
Papers that mentioned: 44