Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1534/genetics.116.195008

https://doi.org/10.1534/genetics.116.195008

A Bayesian Approach for Analysis of Whole-Genome Bisulfite Sequencing Data Identifies Disease-Associated Changes in DNA Methylation

Cited by: 12
Author(s): Owen J. L. Rackham, Sarah R. Langley, Thomas Oates, Eleni Vradi, Nathan Harmston, Prashant K. Srivastava, Jacques Behmoaras, Πέτρος Δελλαπόρτας, Leonardo Bottolo, Enrico Petretto
Published: over 7 years ago

Software Mentions 6

bioconductor: BiSeq
Processing and analyzing bisulfite sequencing data
Papers that mentioned: 33
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: DEXSeq
Inference of differential exon usage in RNA-Seq
Papers that mentioned: 226
bioconductor: DSS
Dispersion shrinkage for sequencing data
Papers that mentioned: 288
pypi: ABBA
Tools for statistical analysis of A/B test results
Papers that mentioned: 6
pypi: analysis
Source code analysis of Python programs
Papers that mentioned: 2,036