Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1534/g3.120.401436

https://doi.org/10.1534/g3.120.401436

The Wheat GENIE3 Network Provides Biologically-Relevant Information in Polyploid Wheat

Cited by: 18
Author(s): Sophie A Harrington, Anna E Backhaus, Ajit Singh, Keywan Hassani‐Pak, Cristóbal Uauy
Published: about 4 years ago

Software Mentions 9

bioconductor: edgeR

Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568

bioconductor: GENIE3

GEne Network Inference with Ensemble of trees
Papers that mentioned: 172

cran: dplyr

A Grammar of Data Manipulation
Papers that mentioned: 1,213

cran: ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441

cran: ggpubr

'ggplot2' Based Publication Ready Plots
Papers that mentioned: 856

cran: NMF

Algorithms and Framework for Nonnegative Matrix Factorization (NMF)
Papers that mentioned: 108

cran: tidyr

Tidy Messy Data
Papers that mentioned: 321

The Kallisto software enables the efficient calculation of atomic features that can be used within a quantitative structure-activity relationship (QSAR) approach. Furthermore, several modelling helpers are implemented.
Papers that mentioned: 307

pypi: sleuth

Papers that mentioned: 59