Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1534/g3.120.401325

https://doi.org/10.1534/g3.120.401325

Adapting Genotyping-by-Sequencing and Variant Calling for Heterogeneous Stock Rats

Cited by: 17
Author(s): Alexander F. Gileta, Jianjun Gao, Apurva S. Chitre, Hannah Bimschleger, Celine L. St. Pierre, Shyam Gopalakrishnan, Abraham A. Palmer
Published: over 4 years ago

Software Mentions 7

cran: IGST
Informative Gene Selection Tool
Papers that mentioned: 7
cran: Platypus
Single-Cell Immune Repertoire and Gene Expression Analysis
Papers that mentioned: 218
cran: plink
IRT Separate Calibration Linking Methods
Papers that mentioned: 399
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562
pypi: Platypus
A minimal language
Papers that mentioned: 218
pypi: plink
A full featured Tk-based knot and link editor
Papers that mentioned: 399
pypi: script
Help for writing shell scripts in Python
Papers that mentioned: 575