Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.15252/embr.201847592

https://doi.org/10.15252/embr.201847592

CDK12 controls G1/S progression by regulating RNAPII processivity at core DNA replication genes

Cited by: 57
Author(s): Anil Paul Chirackal Manavalan, Květa Pilařová, Michael Kluge, Koen Bartholomeeusen, Michal Rájecký, Jan Oppelt, Prashant Khirsariya, Kamil Paruch, Lumír Krejčí, Caroline C. Friedel, Dalibor Blažek
Published: over 5 years ago

Software Mentions 4

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: DEXSeq
Inference of differential exon usage in RNA-Seq
Papers that mentioned: 226
bioconductor: Gviz
Plotting data and annotation information along genomic coordinates
Papers that mentioned: 134
pypi: webserver
Simple to use CLI for setting up nginx webserver in Docker Swarm and adding websites' configs, proxies and static files
Papers that mentioned: 48