Papers: 10.1371/journal.ppat.1008653

https://doi.org/10.1371/journal.ppat.1008653

Genome-wide transcriptomics identifies an early preclinical signature of prion infection

Cited by: 39
Author(s): Silvia Sorce, Mario Nuvolone, Giancarlo Russo, Andra Chincisan, Daniel Heinzer, Merve Avar, Manuela Pfammatter, Petra Schwarz, Mirzet Delic, Mattia Müller, Simone Hornemann, Despina Sanoudou, Claudia Scheckel, Adriano Aguzzi
Published: over 5 years ago

Software Mentions 14

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
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bioconductor: DEXSeq
Inference of differential exon usage in RNA-Seq
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bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
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bioconductor: SGSeq
Splice event prediction and quantification from RNA-seq data
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cran: eulerr
Area-Proportional Euler and Venn Diagrams with Ellipses
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cran: factoextra
Extract and Visualize the Results of Multivariate Data Analyses
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cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
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cran: gplots
Various R Programming Tools for Plotting Data
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cran: NbClust
Determining the Best Number of Clusters in a Data Set
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cran: pheatmap
Pretty Heatmaps
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cran: RColorBrewer
ColorBrewer Palettes
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cran: STAR
Spike Train Analysis with R
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cran: tidyverse
Easily Install and Load the 'Tidyverse'
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pypi: scikit-learn
A set of python modules for machine learning and data mining
Papers that mentioned: 2,431
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