Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.ppat.1008645

https://doi.org/10.1371/journal.ppat.1008645

The Aspergillus fumigatus transcription factor RglT is important for gliotoxin biosynthesis and self-protection, and virulence

Cited by: 23
Author(s): Laure Nicolas Annick Ries, Lakhansing Pardeshi, Zhiqiang Dong, Kaeling Tan, Jacob L. Steenwyk, Ana Cristina Colabardini, Jaire Alves Ferreira Filho, Patrícia Alves de Castro, Lilian Pereira Silva, Nycolas Willian Preite, Fausto Almeida, Leandro José de Assis, Renato Augusto Corrêa dos Santos, Paul Bowyer, Michael Bromley, Rebecca A. Owens, Seán Doyle, Marilene Demasi, Diego Hernández, Luís Eduardo Soares Netto, Mônica Tallarico Pupo, Antonis Rokas, Flávio Vieira Loures, Koon Ho Wong, Gustavo H. Goldman
Published: over 4 years ago

Software Mentions 6

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: DiffBind
Differential Binding Analysis of ChIP-Seq Peak Data
Papers that mentioned: 217
cran: phytools
Phylogenetic Tools for Comparative Biology (and Other Things)
Papers that mentioned: 586
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203
pypi: PACE
Data Quality of Experimental Data
Papers that mentioned: 13,779
pypi: phytools
Useful tools for physicists.
Papers that mentioned: 586