Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.ppat.1008006

https://doi.org/10.1371/journal.ppat.1008006

Shigella sonnei infection of zebrafish reveals that O-antigen mediates neutrophil tolerance and dysentery incidence

Cited by: 17
Author(s): Vincenzo Torraca, Myrsini Kaforou, Jayne Watson, Gina Duggan, Hazel Guerrero-Gutierrez, Sina Krokowski, Michael Hollinshead, Tom Clarke, Rafal Mostowy, Gillian S. Tomlinson, Vanessa Sancho‐Shimizu, Abigail Clements, Serge Mostowy
Published: almost 5 years ago

Software Mentions 3

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: fgsea
Fast Gene Set Enrichment Analysis
Papers that mentioned: 150
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572