Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.ppat.1007852

https://doi.org/10.1371/journal.ppat.1007852

The landscape of transcription initiation across latent and lytic KSHV genomes

Cited by: 11
Author(s): Xiang Ye, Yang Zhao, John Karijolich
Published: over 5 years ago

Software Mentions 6

cran: factoextra
Extract and Visualize the Results of Multivariate Data Analyses
Papers that mentioned: 650
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: CAGE
A generic and fairly complete cellular automata simulation engine.
Papers that mentioned: 101
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203