Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.ppat.1007050

https://doi.org/10.1371/journal.ppat.1007050

Isolation of a natural DNA virus of Drosophila melanogaster, and characterisation of host resistance and immune responses

Cited by: 48
Author(s): William H. Palmer, Nathan Medd, Philippa M. Beard, Darren J. Obbard
Published: over 6 years ago

Software Mentions 5

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: goseq
Gene Ontology analyser for RNA-seq and other length biased data
Papers that mentioned: 132
cran: MCMCglmm
MCMC Generalised Linear Mixed Models
Papers that mentioned: 477
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: cutadapt
Adapter trimming and other preprocessing of high-throughput sequencing reads
Papers that mentioned: 1,562