Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0258157

https://doi.org/10.1371/journal.pone.0258157

Dynamically expressed genes provide candidate viability biomarkers in a model coccidian

Cited by: 4
Author(s): Matthew S. Tucker, Celia O’Brien, Mark C. Jenkins, Benjamin M. Rosenthal
Published: about 3 years ago

Software Mentions 7

bioconductor: ComplexHeatmap
Make Complex Heatmaps
Papers that mentioned: 565
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
cran: reshape2
Flexibly Reshape Data: A Reboot of the Reshape Package
Papers that mentioned: 421
pypi: mapper
Python Mapper: an open source tool for exploration, analysis and visualization of data.
Papers that mentioned: 122
pypi: PACE
Data Quality of Experimental Data
Papers that mentioned: 13,779