Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0241529

https://doi.org/10.1371/journal.pone.0241529

Persistence of the ground beetle (Coleoptera: Carabidae) microbiome to diet manipulation

Cited by: 5
Author(s): Anita Silver, Sean Perez, Melanie Gee, Bethany Xu, Shreeya Garg, Kipling Will, Amanjit Gill
Published: over 3 years ago

Software Mentions 9

bioconductor: DECIPHER
Tools for curating, analyzing, and manipulating biological sequences
Papers that mentioned: 415
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
cran: ape
Analyses of Phylogenetics and Evolution
Papers that mentioned: 918
cran: picante
Integrating Phylogenies and Ecology
Papers that mentioned: 414
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
cran: VennDiagram
Generate High-Resolution Venn and Euler Plots
Papers that mentioned: 626
pypi: ape
A Productive Environment - make/rake/ant/fab-like system with support for FOSD
Papers that mentioned: 918
pypi: PACE
Data Quality of Experimental Data
Papers that mentioned: 13,779