Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0240996

https://doi.org/10.1371/journal.pone.0240996

Cited by: 11
Author(s): Antonino Malacrinò, Victoria A Sadowski, Tvisha Martin, Nathalia Cavichiolli de Oliveira, Ian J. Brackett, James D. Feller, Kira Harris, ORLANDO COMBITA-HEREDIA, Rosa Vescio, Alison E. Bennett
Published: over 3 years ago

Software Mentions 8

bioconductor: DESeq2

Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583

bioconductor: phyloseq

Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702

cran: emmeans

Estimated Marginal Means, aka Least-Squares Means
Papers that mentioned: 1,009

cran: lme4

Linear Mixed-Effects Models using 'Eigen' and S4
Papers that mentioned: 9,267

cran: PERMANOVA

Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292

cran: PRISMA

Protocol Inspection and State Machine Analysis
Papers that mentioned: 9,815

cran: vegan

Community Ecology Package
Papers that mentioned: 6,903

pypi: PACE

Data Quality of Experimental Data
Papers that mentioned: 13,779