Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0239711

https://doi.org/10.1371/journal.pone.0239711

Reproducibility across single-cell RNA-seq protocols for spatial ordering analysis

Cited by: 5
Author(s): Morten Seirup, Li‐Fang Chu, Srikumar Sengupta, Ning Leng, Hadley Browder, Kevin Kapadia, Christina M. Shafer, Bret Duffin, Angela L. Elwell, Jennifer M. Bolin, Scott Swanson, Ron Stewart, Christina Kendziorski, James A. Thomson, Rhonda Bacher
Published: about 4 years ago

Software Mentions 5

bioconductor: SCnorm
Normalization of single cell RNA-seq data
Papers that mentioned: 15
bioconductor: scran
Methods for Single-Cell RNA-Seq Data Analysis
Papers that mentioned: 113
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
pypi: PACE
Data Quality of Experimental Data
Papers that mentioned: 13,779
pypi: Wave
Whole Architecture Verification
Papers that mentioned: 244