Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0239197

https://doi.org/10.1371/journal.pone.0239197

Effects of germline and somatic events in candidate BRCA-like genes on breast-tumor signatures

Cited by: 13
Author(s): Weston R. Bodily, Brian H. Shirts, Tom Walsh, Süleyman Gülsüner, Mary‐Claire King, Alyssa Parker, Moom R. Roosan, Stephen R. Piccolo
Published: about 4 years ago

Software Mentions 12

cran: cowplot
Streamlined Plot Theme and Plot Annotations for 'ggplot2'
Papers that mentioned: 298
cran: data.table
Extension of 'data.frame'
Papers that mentioned: 33
cran: deconstructSigs
Identifies Signatures Present in a Tumor Sample
Papers that mentioned: 85
cran: dplyr
A Grammar of Data Manipulation
Papers that mentioned: 1,213
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: ggrepel
Automatically Position Non-Overlapping Text Labels with 'ggplot2'
Papers that mentioned: 164
cran: readr
Read Rectangular Text Data
Papers that mentioned: 80
cran: reshape2
Flexibly Reshape Data: A Reboot of the Reshape Package
Papers that mentioned: 421
cran: Rtsne
T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut Implementation
Papers that mentioned: 255
cran: tidyr
Tidy Messy Data
Papers that mentioned: 321
cran: UpSetR
A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets
Papers that mentioned: 319
pypi: PACE
Data Quality of Experimental Data
Papers that mentioned: 13,779