Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0236226

https://doi.org/10.1371/journal.pone.0236226

Genome-wide analysis of the polyamine oxidase gene family in wheat (Triticum aestivum L.) reveals involvement in temperature stress response

Cited by: 10
Author(s): Fatemeh Gholizadeh, Ghader Mirzaghaderi
Published: over 4 years ago

Software Mentions 7

bioconductor: ballgown
Flexible, isoform-level differential expression analysis
Papers that mentioned: 21
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: ggtree
an R package for visualization of tree and annotation data
Papers that mentioned: 474
bioconductor: msa
Multiple Sequence Alignment
Papers that mentioned: 50
cran: ape
Analyses of Phylogenetics and Evolution
Papers that mentioned: 918
pypi: ape
A Productive Environment - make/rake/ant/fab-like system with support for FOSD
Papers that mentioned: 918
pypi: msa
Maven settings administrator
Papers that mentioned: 50