Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0232646

https://doi.org/10.1371/journal.pone.0232646

Two-step mixed model approach to analyzing differential alternative RNA splicing

Cited by: 0
Author(s): Li Luo, Huining Kang, Xichen Li, Scott A. Ness, Christine A. Stidley
Published: about 4 years ago

Software Mentions 7

bioconductor: baySeq

Empirical Bayesian analysis of patterns of differential expression in count data
Papers that mentioned: 139

bioconductor: DEXSeq

Inference of differential exon usage in RNA-Seq
Papers that mentioned: 226

bioconductor: edgeR

Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568

bioconductor: IsoformSwitchAnalyzeR

Identify, Annotate and Visualize Isoform Switches with Functional Consequences from both short- and long-read RNA-seq data
Papers that mentioned: 16

The Kallisto software enables the efficient calculation of atomic features that can be used within a quantitative structure-activity relationship (QSAR) approach. Furthermore, several modelling helpers are implemented.
Papers that mentioned: 307

pypi: PACE

Data Quality of Experimental Data
Papers that mentioned: 13,779