Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0227116

https://doi.org/10.1371/journal.pone.0227116

Modeling the effect of prolonged ethanol exposure on global gene expression and chromatin accessibility in normal 3D colon organoids

Cited by: 20
Author(s): Matthew Devall, Lucas T. Jennelle, Jennifer Bryant, Stephanie A. Bien, Ulrike Peters, Steven M. Powell, Graham Casey
Published: almost 5 years ago

Software Mentions 3

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: DiffBind
Differential Binding Analysis of ChIP-Seq Peak Data
Papers that mentioned: 217
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759