Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0224693

https://doi.org/10.1371/journal.pone.0224693

ADAPTS: Automated deconvolution augmentation of profiles for tissue specific cells

Cited by: 15
Author(s): Samuel A. Danziger, David L. Gibbs, Ilya Shmulevich, Mark McConnell, Matthew Trotter, Frank Schmitz, David J Reiss, Alexander V. Ratushny
Published: about 5 years ago

Software Mentions 7

bioconductor: ArrayExpress
Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet
Papers that mentioned: 1,962
bioconductor: DeconRNASeq
Deconvolution of Heterogeneous Tissue Samples for mRNA-Seq data
Papers that mentioned: 23
cran: ADAPTS
Automated Deconvolution Augmentation of Profiles for Tissue Specific Cells
Papers that mentioned: 6
cran: Seurat
Tools for Single Cell Genomics
Papers that mentioned: 1,512
cran: Spillover
Spillover/Connectedness Index Based on VAR Modelling
Papers that mentioned: 9
pypi: approx
Set of tools for comparing complex objects
Papers that mentioned: 1
pypi: PACE
Data Quality of Experimental Data
Papers that mentioned: 13,779