Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0220934

https://doi.org/10.1371/journal.pone.0220934

Profiling DNA methylation patterns of zebrafish liver associated with parental high dietary arachidonic acid

Cited by: 18
Author(s): Anne‐Catrin Adam, Kai Kristoffer Lie, Paul Whatmore, Lars Martin Jakt, Mari Moren, Kaja H. Skjærven
Published: over 5 years ago

Software Mentions 5

bioconductor: biomaRt
Interface to BioMart databases (i.e. Ensembl)
Papers that mentioned: 446
bioconductor: BiSeq
Processing and analyzing bisulfite sequencing data
Papers that mentioned: 33
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: genomation
Summary, annotation and visualization of genomic data
Papers that mentioned: 17
pypi: dist
Compute distance between two coordinates on the map
Papers that mentioned: 11