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Papers: 10.1371/journal.pone.0220518

https://doi.org/10.1371/journal.pone.0220518

Differential gene expression and gene ontologies associated with increasing water-stress in leaf and root transcriptomes of perennial ryegrass (Lolium perenne)

Cited by: 4
Author(s): Albert Fradera-Sola, Ann Thomas, Dagmara Gasior, John A. Harper, Matthew J. Hegarty, Ian Armstead, Narcís Fernández-Fuentes
Published: about 7 years ago

Software Mentions 9

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
Very Likely Science (100)
bioconductor: EBSeq
An R package for gene and isoform differential expression analysis of RNA-seq data
Papers that mentioned: 261
Very Likely Science (100)
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
Very Likely Science (100)
bioconductor: GenomicFeatures
Conveniently import and query gene models
Papers that mentioned: 141
Very Likely Science (90)
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
Very Likely Science (78)
cran: AR
Another Look at the Acceptance-Rejection Method
Papers that mentioned: 533
Very Likely Science (75)
pypi: ns
Simply declaring namespaces
Papers that mentioned: 72
Very Likely Science (65)
pypi: up
Up - A next generation status monitor
Papers that mentioned: 6
Very Likely Science (65)
pypi: voom
A python message bus that you can put 4 million volts through.
Papers that mentioned: 136
Likely Science (40)