Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0215495

https://doi.org/10.1371/journal.pone.0215495

CiiiDER: A tool for predicting and analysing transcription factor binding sites

Cited by: 120
Author(s): Linden J. Gearing, Helen E. Cumming, R. A. Chapman, Alexander M. Finkel, Isaac Woodhouse, Kevin Luu, Jodee Gould, Samuel C. Forster, Paul J. Hertzog
Published: about 5 years ago

Software Mentions 3

bioconductor: GEOquery
Get data from NCBI Gene Expression Omnibus (GEO)
Papers that mentioned: 328
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
cran: JASPAR
R modules for JASPAR databases: a collection of transcription factor DNA-binding preferences, modeled as matrices
Papers that mentioned: 1,283