Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0201483

https://doi.org/10.1371/journal.pone.0201483

HSRA: Hadoop-based spliced read aligner for RNA sequencing data

Cited by: 11
Author(s): Roberto R. Expósito, Jorge González-Domínguez, Juan Touriño
Published: over 6 years ago

Software Mentions 5

bioconductor: ADAM
ADAM: Activity and Diversity Analysis Module
Papers that mentioned: 482
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: bzip2
Papers that mentioned: 58
pypi: Crossbow

Papers that mentioned: 63
pypi: kallisto
The Kallisto software enables the efficient calculation of atomic features that can be used within a quantitative structure-activity relationship (QSAR) approach. Furthermore, several modelling helpers are implemented.
Papers that mentioned: 307