Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0200729

https://doi.org/10.1371/journal.pone.0200729

The murine female intestinal microbiota does not shift throughout the estrous cycle

Cited by: 18
Author(s): Jessica G. Wallace, Ryan Potts, Jake C. Szamosi, Michael G. Surette, Deborah M. Sloboda
Published: over 6 years ago

Software Mentions 7

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census data
Papers that mentioned: 1,702
cran: dplyr
A Grammar of Data Manipulation
Papers that mentioned: 1,213
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: PERMANOVA
Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292
cran: tidyr
Tidy Messy Data
Papers that mentioned: 321
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903