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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1371/journal.pone.0198773

https://doi.org/10.1371/journal.pone.0198773

When old metagenomic data meet newly sequenced genomes, a case study

Cited by: 9
Author(s): Xin Li, Saleh A. Naser, Annette R. Khaled, Haiyan Hu, Xiaoman Li
Published: about 7 years ago

Software Mentions 4

cran: fasta
Fast Adaptive Shrinkage/Thresholding Algorithm
Papers that mentioned: 848
Very Likely Science (60)
pypi: fasta
The fasta python package enables you to deal with biological sequence files easily.
Papers that mentioned: 848
Very Likely Science (80)
pypi: MetaPhlAn
MetaPhlAn is a computational tool for profiling the composition of microbial communities (Bacteria, Archaea and Eukaryotes) from metagenomic shotgun sequencing data (i.e. not 16S) with species-level. With the newly added StrainPhlAn module, it is now possible to perform accurate strain-level microbial profiling.
Papers that mentioned: 306
Very Likely Science (100)
pypi: seqtk
seqtk provides various tools for Sequence.
Papers that mentioned: 213
Very Likely Science (65)