Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0192613

https://doi.org/10.1371/journal.pone.0192613

NetMiner-an ensemble pipeline for building genome-wide and high-quality gene co-expression network using massive-scale RNA-seq samples

Cited by: 17
Author(s): Hua Yu, Bingke Jiao, Lu Lu, Pengfei Wang, Shuangcheng Chen, Chengzhi Liang, Wei Liu
Published: over 6 years ago

Software Mentions 4

bioconductor: GOSim
Computation of functional similarities between GO terms and gene products; GO enrichment analysis
Papers that mentioned: 41
cran: GeneNet
Modeling and Inferring Gene Networks
Papers that mentioned: 87
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
pypi: TopHat
TopHat Platform
Papers that mentioned: 5,017