Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0190279

https://doi.org/10.1371/journal.pone.0190279

pyPaSWAS: Python-based multi-core CPU and GPU sequence alignment

Cited by: 12
Author(s): Sven Warris, N. Roshan N. Timal, Marcel Kempenaar, Arne M. Poortinga, Henri van de Geest, Ana Lucia Vărbănescu, Jan-Peter Nap
Published: almost 7 years ago

Software Mentions 6

cran: fasta
Fast Adaptive Shrinkage/Thresholding Algorithm
Papers that mentioned: 848
cran: OpenCL
Interface allowing R to use OpenCL
Papers that mentioned: 236
cran: SAM
Sparse Additive Modelling
Papers that mentioned: 4,566
pypi: biopython
Freely available tools for computational molecular biology.
Papers that mentioned: 114
pypi: fasta
The fasta python package enables you to deal with biological sequence files easily.
Papers that mentioned: 848
pypi: numpy
Fundamental package for array computing in Python
Papers that mentioned: 832