Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1371/journal.pone.0186275
https://doi.org/10.1371/journal.pone.0186275
Cited by: 38
Author(s): Kirsten M. Johnson, Cenny Taslim, Ranajeet S. Saund, Stephen L. Lessnick
Published: over 6 years ago
Software Mentions 10
bioconductor: BiocParallel
Bioconductor facilities for parallel evaluationPapers that mentioned: 30
bioconductor: BSgenome
Software infrastructure for efficient representation of full genomes and their SNPsPapers that mentioned: 47
bioconductor: ChIPpeakAnno
Batch annotation of the peaks identified from either ChIP-seq, ChIP-chip experiments or any experiments resulted in large number of chromosome rangesPapers that mentioned: 145
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
bioconductor: GenomicAlignments
Representation and manipulation of short genomic alignmentsPapers that mentioned: 134
bioconductor: regioneR
Association analysis of genomic regions based on permutation testsPapers that mentioned: 30